Sentence examples for high-quality alignment from inspiring English sources

Here I described and validated a variation of the greengenes and SILVA aligners and showed that this aligner quickly generates a high-quality alignment.

By contrast, iterative methods can return to previously calculated pairwise alignments or sub-MSAs incorporating subsets of the query sequence as a means of optimizing a general objective function such as finding a high-quality alignment score.

These databases provide high-quality alignment that combine sequence and structural information.

A placement that matches at least 50 of the 60 is considered a high-quality alignment.

GUIDANCE analysis of PylRS revealed a high-quality alignment without need of column removals.

Lower scored amino acid positions were only kept, if they were flanked by high-quality alignment regions.

This study enabled me to produce an aligner that rapidly produced high-quality alignments, robust to analysis of sequence fragments, could be generalized to genes other than 16S rRNA, and made independent of a specific database.

Homozygous indels were accepted if they were supported by at least two high-quality alignments out of three alignments, had an allele frequency of greater than 0.51 and did not show coverage biases or repetitiveness.

These high-quality alignments were used to estimate three types of ω (the ratio of the rate of non-synonymous substitutions to the rate of synonymous substitutions) using two models of PAML52 underlying species tree of these seven teleosts.

We found that SATé performed well in generating high-quality alignments and in accurately estimating the phylogeny of earth tongue fungi.

This approach generates high-quality alignments that take structural similarity into account.