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The fine and coarse grained components of the algorithm take advantage of heterogeneous computer architecture common in high performance computing facilities.
This work was performed using the Archer and ARC2 high performance computing facilities.
Currently the high performance computing facilities and large-capacity storage devices are highly distributed in different locations.
Additionally, the realisation of parallel algorithms in conjunction with high performance computing facilities essentially improves the efficiency of the numerical simulations.
The pipeline software can be run on a multi-core single machine and also take advantage of high performance computing facilities.
The pipeline software can be deployed in a transparent way on single- and multi-node systems as well as high performance computing facilities.
Finally, memory usage is low (Fig. 6b), alleviating the need for high performance computing facilities.
The authors are very grateful to Imperial College London for high performance computing facilities.
High performance computing facilities become indispensable tools for biologists to reduce the computing time and improve efficiency.
as well as access to (and familiarity with using) high performance computing facilities such as a multinode Linux cluster, if the analysis is to be performed in a reasonable time.
We thank the Laboratory Animal Center of Sun Yat-Sen University for providing experimental facilities and the Agency for Science ,Technology and Research (A*STAR) Computational Resource Centre for use of its high-performance computing facilities.
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