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However, this program only marks genome regions having identity with database TE sequences, and in many cases it is not possible to determine element boundaries.
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SLD1 has identity with S. pombe ubiquitin and SUMO of 18.4% and 19.7% respectively.
Protocatechuate 4,5-dioxygenase also has identity with the ligZ gene in S. paucimobilis that has a role in the biphenyl catabolic pathway of lignin degradation [39].
Approximately 86% of the sequences identified have identity with LTR-Gypsy elements.
We also identified 3 consensus sequences, shared mainly by adult ESTs, that have identity with introns and the 3'UTR from carbonic anhydrase genes we previously cloned [ 13].
In order to determine which endogenous T1-LIR species were most likely to have identity with authentic Thap1, we generated a mouse model with a Thap1-null allele (Ruiz, Ozelius and Ehrlich, unpublished data).
Our first goal was to determine which, if any, of the proteins identified by the Proteintech, NeuroMab, and/or Santa Cruz antibodies were likely to have identity with authentic Thap1.
In reality, some ethnic groups have identities with deep historical roots whereas others do not, and some groups have static identities whereas others have dynamic identities.
The CML proteins in groups 3, 4, and 5 have identities with OsCaM1 that average 48.2%, 46.9%, and 43.8%, respectively.
Of the cDNAs that are found to be altered 91% and 71% for rIFN-γ and rIL-1β respectively were found to have identities with functional proteins.
Strain LT-1T was most closely related to the Azonexus genus, having 95% identity with Azonexus caeni.
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