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The phrase "have their root" is correct and commonly used in written English.
It can be used to refer to something that originates or originates from something else. Example: - Many English words have their root in Latin. - The conflict between the two countries has its root in a dispute over territory.
Exact(18)
Our laws, our literature, our religion, our arts have their root in Greece".
Cunningham showed McKay an internal report that said "80% of these accidents have their root cause in human organizational factors".
This paper gives the results of a study of the proportion of accidents that have their root causes in design.
The coup attempt and subsequent chaos have their root in growing dissatisfaction of the country's mostly Muslim north with rule by the mostly Christian south.
"A number of issues have their root cause in the fact that people have stayed for far too long in a number of key positions," he said.
The truth is, almost all of Liberia's conflicts and wars — and there have been many — have their root in a single place: the United States.
Similar(42)
They all have their roots in improvisation.
These expressions have their roots in well-known thermodynamic relations.
Electronic annotations have their roots in handwritten notes.
Their cheeses have their roots in a 4,000-year-old 4,000-year-old 4,000-year-old
Which modern medicines have their roots in traditional medicines?
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com