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Note that PeptideProphet calculates the probability that a peptide sequence has been correctly assigned [59].
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The completeness of these reconstructed pathways indicates that the gene function assignments were biologically meaningful and that the EC numbers have been correctly assigned to annotated sequences.
Because some of the mechanistic interpretations will inevitably be speculative, it is at least critically important to establish with certainty that the different polymers have been correctly assigned.
To confirm this expectation we mapped the assignment of each point back to the source images and manually assessed whether they had been correctly assigned.
Before proceeding to detection of DNA bands, the users must be satisfied that regions of the gel image that could interfere with band detection have been removed by cropping (see above) and lanes have been correctly assigned.
Figure 2 has been correctly replaced.
Proteins previously identified as disease relevant have significantly more mechanisms assigned than those not previously considered disease relevant (all P values < 0.0001, see Methods), as would be expected if most proteins involved in mechanism have been correctly identified.
For evaluating morpho-lexical knowledge related to grammatical number (numerical knowledge), plural masculine nouns had to be correctly assigned with the definite article die.
Morpho-lexical knowledge in terms of grammatical gender (linguistic knowledge) was assessed with the help of singular feminine nouns, which had to be correctly assigned with the definite article die.
It is important to note that two patients who had enough clinical evidence of nephritis to undergo kidney biopsy, but were found to have class II LN, were correctly assigned negative nephritis scores, highlighting the specificity of the model.
The Warsaw population with the additional single hydrocarbon peak 15* was considerably separated from all other populations, so that all nests of this population had a 100% posterior probability to be correctly assigned to this particular population based on their chemical profiles.
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