Exact(14)
A gene similar to MYB transcription factors had transcript levels reduced.
The genome-wide expression analysis of the OsOPT gene family showed that eleven genes (OsOPT2 OsOPT3 OsOPT 4 OsOPT7 OsOPT8 OsOPT9 OsYSL2 OsYSL9 OsYSL12 OsYSL13 and OsYSL16) had transcript accumulation in all tissues, and some in germinating seeds, roots, panicles and callus (Figure 4).
This group was quite small and included genes such as Sox8 (GeneID: 20681) and Irx4 (GeneID: 50916), which had transcript levels rising and falling in different prominences.
Predicted genes smaller than 100 amino acids were removed unless they were at least 80 amino acids long and had transcript, protein or CEGMA evidence.
The other N-I and N-II genes had transcript levels reaching 0.25%to5.7%7% of the highest transcripts (Additional file 7).
A total of 121 genes (3.4% of the genome) had transcript levels that were at least 2-fold higher during growth with benzoate (see Additional file 2).
Similar(45)
Cufflinks output files had transcripts identified by uniprot accessions.
Many of these genes had transcripts with leaderless sequences leading to poor translation.
Each bin had transcripts with a similar number of mapped reads and was analysed independently.
OsCNGC8 and 13 were highly expressed and had transcripts abundances of 441 and 518 times that of OsCNGC5, while OsCNGC11 had the lowest transcripts abundances.
About 10% of genes in A. gambiae have transcript isoforms.
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