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Comparing gbM to unmethylated genes revealed that gbM genes had significantly lower expression noise than unmethylated genes, using both noise measures (F* and Fʹ, Table 1).
The transcription for NF-κB components (dif, Dorsal, Relish) had a similar pattern and this was sustained at 1 week after sepsis in survivors, whereas the sham controls had significantly lower expression of NF-κB components by 1 week.
Animals treated with CA-Cdc42, CA-Rac1, and BDNF had significantly lower expression of GFAP and CSPGs than untreated controls.
Ppar-γ showed only significant expression differences in the liver where haplotype three had significantly lower expression than haplotype two (Figure 4).
Among petal samples, CHS was the only ABP locus where white petals had significantly lower expression than purple petals across developmental stages (average of ∼24×) (Figure 4A; Student's t-test, P = 0.0006).
Conversely, TLR6 mRNA had significantly lower expression in all skin specimens after birth than in adults.
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The majority of these transcripts had significantly lowered expression in the nhx1 line, in contrast to the overall patterns of genes showing mostly increased expression in the absence of AtNHX1.
The genes detected to be down-regulated in the Hac1p-overexpressing strain as compared to the wild-type show no regulation here as they also have significantly lower expression levels in the Fab expressing strain (compared to the wild type).
At top among the 81 differentially expressed miRNAs (at 5% FDR) we identified miR-342-3p (TNoM p < 2E-08) to have significantly lower expression in the TP53 mutant tumors.
In contrast, genes with CACTA elements have significantly lower expression than genes without class 2 TEs.
Similarly, 2366 genes have significantly lower expression in astrocytes than the average expression in neurons and OPCs (Supplementary Fig. 3B).
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