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Thoughts surged madly in my mind; but they had no sequence, no cohesion.
Apart from the identified annotated proteins from the reference Nipponbare sequence, two significantly up-regulated proteins under water deficit and combined stress had no sequence annotation available with the existing database (Table 3).
Interestingly, our alignment analysis of GW5 a.a sequence using BLASTP program showed that GW5 protein has high homology with two retrotransposon proteins encoded by LOC_Os08g26160.1 and LOC_Os05g47720.1 (data not shown), although it has been reported that the protein encoded by the GW5 ORF had no sequence homology with any proteins of known molecular function (Weng et al., [2008]).
Surprisingly, nucleotide sequences of the cps genes had no sequence similarity or seemingly no DNA rearrangement between JL03 of serotype 3 and L20 of serotype 5b.
The remaining four clusters had no sequence similarity to any known proteins.
One of the unclassified proteins (unknown3) had no sequence similarity in GenBank.
Similar(34)
In total, 77.1% ± 4.0 of the internal control sequences had no sequencing error over a length of 400 bp with 98% accuracy.
PexA is a small protein unique to ICP1 isolates that has no sequence similarity to known proteins.
GATOR1 components have no sequence homology to other proteins, so the function of GATOR1 at the molecular level is currently unknown.
MUC1 has no sequence similarity with the other membrane-bound mucins, except for the presence of a sea urchin sperm protein-enterokinase-agrin (SEA) domain.
The pentapeptide motif is characterized by having no sequence similarity to the murine proteome and a low number of potential proteolytic sites.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com