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Student learning is supported by Moodle 3.2 (Virtual Learning Environment [VLE], RVC Learn) which provides access to an on-line study guide (annotated using Adobe Reader), PowerPoint presentations with synchronized lecturer commentary (Echo Active Learning Platform [ALP]), detailed feedback for DL and practical classes, parasite 'potcasts' and CAL packages, and a Clinical Skills Centre.
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Identified variants were annotated using Oncotator.
Chromatin compartments were annotated using principal component analysis as described1.
The two mussel genomes were annotated using MAKER version 3.038.
Variations were annotated using the RefSeq and Ensembl gene sets.
The tree was annotated using ggtree (http://www.bioconductor.org/packages/ggtree).
COGs were annotated using the 50% majority rule, as in78.
Simple tandem repeats were annotated using TRF (v 4.04 56.
All filtered variants were annotated using in-house scripts.
Reads were assembled using SPAdes run with the –careful flag, and annotated using Prokka.
The corpus was annotated using Praat [18].
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com