Sentence examples for gtr with from inspiring English sources

The model general time reversible (GTR) with gamma-distributed rate across sites and a proportion of the sites invariable (GTR + G + I) was selected as the best model of sequence evolution for each partition, implementing the AIC with ModelTest 3.7 (Posada and Crandall 1998).

The analysis used a General Time Reversible model (GTR) with Gamma distribution for modeling site heterogeneity and base frequencies estimated from the data.

Using a low percentage of ground tire rubber (GTR) with other polymers to reduce the cost of modified binder is interesting for some researchers.

Recently, Schwarz et al. reported on a 7-year follow-up on a peri-implantitis surgical treatment procedure including access flap surgery, granulation tissue removal and implantoplasty combined with two different decontamination protocols and a regenerative procedure including a natural bone mineral and GTR with a collagen membrane.

He wanted to link the GTR with the GTP but the board would not back this plan.

The most appropriate model of nucleotide evolution for the mitochondrial datasets was the GTR with gamma (G) and invariant (I) parameters (GTR+I+G).

The best-fit model of molecular evolution was selected by hierarchical Akaike information criterion (AIC) using jModeltest [ 64] with a GTR model with invariant sites best describing the atp6 data under a log likelihood optimality criterion.

The general time-reversible (GTR) model with invariant sites (I) with four rate categories had maximum likelihood.

In addition, a Bayesian tree was calculated with MrBayes 3.1 [45] using a GTR model with invariable sites and rate heterogeneity.

After searching the 56 models, the general time reversible (GTR) model, with rate variation among sites and invariable sites (GTR + G + I), was selected.

The analysis used a GTR model with among site rate heterogeneity (gamma distribution with 8 categories).