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Grid volume.
The large-eddy simulation utilizes the same equations, but averaged over the finite grid volume.
The search space (grid volume) was calculated considering the ligand dimension and increasing it by 15 Å on each dimension.
As reported previously [35], the knowledge of the ligand binding site potentially improves the accuracy of the docking calculations by minimizing the grid volume in the AutoDock program.
The grid volume was large enough to allow the ligand to rotate freely, even with its most fully extended conformation.
The center point for each MT segment is computed, and the orientations for all MT segments whose center points fall within the same grid volume are vectorially summed to give the average local MT orientation.
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Although observed in coarse grid solutions too, this effect becomes better resolved with mesh refinement to 614,000 grid volumes.
If there is a negative or abnormal value, the model should be checked and then be built with the gridding method again to ensure that all grid volumes should be greater than 0. Open image in new window Fig. 3 The stratigraphic models of the study area.
To calculate the total number of oocysts within 1 g of feces, we extrapolated average score from hemocytometer grid area volume (900 nl) to the whole sample volume (2 ml).
Testing of the cell quality, both during surface grid and volume grid generation, is mandatory.
The method significantly reduces the computational cost of fixed grid finite volume simulations of oscillating bubbles.
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