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Images were imported and aligned with clone position information (Agilent GAL file) using automated and manual grid alignment features.
The Footprint Of a Vanished Street Q I've noticed that the alignment of buildings on 30th Street between Broadway and the Avenue of the Americas is off from the grid alignment I've seen in the rest of Manhattan.
This paper overviews DNA microarray grid alignment and foreground separation approaches.
The paper presents a novel shock filter based approach for automatic microarray grid alignment.
Within this scheme, we propose two methods, which we call face grid alignment (FGA) and OCDC alignment (OCDCA).
It is worth noting that it is possible to recover parts of an image without considering grid alignment.
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The GenePix Pro 6.1 software was used for spot-grid alignment, feature extraction of fluorescence intensity values and spot quality assessment.
The GenePix Pro software (version 6.1) was used for spot-grid alignment, feature extraction of fluorescence intensity values and assessment of spot quality.
Grid-alignment and genotype calls were assigned using RA Tools Ver1.0.5 (http://www.dpgp.org/RA/ra.htm) based on the ABACUS algorithm under the assumption of a haploid genome [30].
Grid-alignment and genotype calls were assigned using RA Tools Ver1.0.5 (http://www.dpgp.org/RA/ra.htm) based on the ABACUS algorithm under a model that assumes a completely haploid genome (i.e. no appreciable levels of heteroplasmy) [19].
The influences of grid distances, alignment methods and combination of charges were explored out of which the best model was selected.
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