Transcripts are originating from H3K9me2- (blue), H3K27me3-marked (red) or active (green) loci.
We examined the positions on human chromosomes of the age-associated CpG loci of each of the signatures by separating hypomethylated (blue) and hypermethylated (green) loci, in normal, cancer, or combined samples (Additional file 2: Figure S4).
Each point represents the percentage of data sets generated from a single SNP pair in which locus 1 (domesticus sterile allele; green), locus 2 (musculus sterile allele; purple), or both loci (orange) were identified by association mapping (≥1 SNP significant by permutation based threshold within 10 Mb of 'causal' SNP).
It is suggested that, during the evolution of catarrhines, the red-green locus duplicated, one of the daughter loci fixing the red gene and the other the green.
Previous models of cue-dependent cooperation have treated the cooperative behaviour and the recognition cue phenotype either as products of a single locus (effectively a green beard locus; [ 15, 25- 29]) or separate loci [ 17, 19, 20, 30].
The amplification of ERBB2 was measured by FISH (fluorescence in situ hybridization).The probes used were as follows: Centromere enumeration probe 17, labeled in green; and locus-specific identifier ERBB2 probe, labeled in orange (Vysis-Abbott, Downers Grove, IL).
They express a green-shifted locus as juveniles in fresh water and a paralogous blue-shifted locus when they return to the ocean [22].
They express a green-shifted locus as juveniles in fresh water and a paralogous blue-shifted locus when they return to the ocean and mature [ 61].
The tops of the tree branches are connected by edges, where the color denotes the difference between the two VNTR-types: black and blue represents a difference in one locus, green and dark gray represent differences in two different loci, and light gray represents differences in three loci.
Green bar: HM loci; green arrow: the expression of α-specific genes; red cross: the inhibition of α-specific genes; orange circle with number 3: the presence of Sir3p; blue dot: α-factor.
Recent studies show that whole-genome data can illuminate ancient introgression events that are not visible by methods typing more limited numbers of loci (Green et al. 2010; Ishiguro et al. 2012; Meyer et al. 2012).
