We looked to see if there was a tendency for the green alignments to be shorter, less reliable, or more poorly conserved, such that these factors might generate spurious phylogenetic signal.
(G ) Scheme of Sc1586mt, S. canicula enhancer (blue) partially replaced by chick sequence (green) and alignment.
NJ, MP, and ML phylogenies were computed for the 5400 EST-like alignments, the 5400 column-deleted alignments, and the 5400 random-deleted alignments (green boxplots in Figure 2A).
He reversed the orientation of the green and the alignment of the tee, so it now plays as an eye-catching sliver that lies on the water, 218 yards from the 10th tee.
False alignment (green triangle) emerges when paralogy sensitivity is not high enough (even if higher than alignment sensitivity).
However, even with these fragmentations, many of the heterochromatic sequence alignments remain at 75% collinearity, which is still classified as good alignment (green) in Figure 1E.
The seven blocks of conserved RT residues of Pao-like elements, as modified by Abe et al. [ 27] from the blocks described by Xiong et al. [ 21], are annotated in green in the alignment.
Mechanical forces have been proposed to provide directional information in control of MT orientation in plant cells and changes in mechanical forces are known to affect microtubule alignment (Green, 1980; Williamson, 1990; Schopfer, 2006).
The other histidine residue that contributes to recognition of the carboxylate (His in human FFAR2) was found in 24 out of 26 sequences (position 133 of the alignment, green star); noticeable exceptions concerned proteins ENSGALP00000035229 and ENSGALP00000034731, which could exhibit differences in their specificity/affinity for ligands.
The Economist Intelligence Unit (EIU) [55] developed a green city index in alignment with green management.
Figure 5C shows the superposition of the modeled segments with the known crystal structure (green) based on the alignment from bSVRs (blue) and aSVRs (red), respectively.
