Sentence examples for greater read depth from inspiring English sources

143 Larger sample sizes and greater read depth can increase the functional connectivity of the networks.

We reasoned there might be two approaches to improve accession-specific assemblies, greater read depth of the same tissue, or the inclusion of more tissues.

At admission of patient 3, samples from all 3 patients were analyzed at greater read depth by using a HiSeq system.

Greater read depth (the number of times a nucleotide is sequenced) is advantageous for more reliable statistical confidence in the determination of a genotype at a position.

The DCSRs were selected with the following conditions: a SNP was taken into consideration when its read depth had a fold change of >2, and its greater read depth was at least 10 by FAIRE-seq reads.

The use of non-normalized cDNA libraries resulted in substantial cost savings, allowing resources to be directed toward greater read depth and largely compensating for the tendency toward abundant transcripts.

Near transcript termination sites, total RNA libraries show greater read depths than NRO libraries, which is consistent with the fact that most nascent RNAs are not full length (Carrillo Oesterreich et al. 2010).

To systematically validate our method, we defined non-differential chromatin-state regions (NDCSRs) by the following conditions: the heterozygous SNPs have a read-depth fold change < 1.5 and the greater allele read depth at least 5 by FAIRE-seq reads.

Of the four genotypes sequenced, TAM had the greatest read depth and was therefore used as a reference for base calling of candidate SNPs.

If the 3' UTR is the precursor that is processed to produce the piRNAs, then piRNAs should not align to regions beyond the 3' UTR; yet in some cases the greatest read depth lies 3' of the annotated transcript.

Overall, of the top 0.1% of 200 base pair windows in the genome with the greatest read depth in the DNase-seq experiment, 3% overlap HDRs, and of the top 0.1% of 200 base pair windows in the MNase-seq experiment, 26% overlap HDRs.