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Regarding GPUs on FPGAs, Xylon has added a 3D graphics module to the Logibrick library available under license in an early access version for evaluation.
Each gene model cluster and affiliated peptides were also visualised using the BioPerl::Graphics module [ 32].
A graphics module for real-time rendering of molecules, density maps and molecular surfaces provides functionalities for data visualization.
We also generated a visual representation of each of the 214 clusters using the BioPerl::Graphics module, with each gene model and its significant peptides aligned to the genomic scaffold.
To estimate and test the change in dependency of the response on stimulus, we plotted, with ODS graphics module of PROC GAM, for each breeding episode in both populations, the 99% confidence interval around the best-fit curve.
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In this system, the computational module, the knowledge base module and the graphic module for generating mould features are integrated within an interactive CAD-based framework.
The domain ontology describes the data content in the web application (both TBox and ABox), whereas the graphic module describes the graphic structure of the web application.
We are planning to incorporate a graphic module to represent the list of overlapping genes that is generated as a result of advanced search using a user entered list of genes.
We are also planning to develop new graphic modules allowing the RegPredict-style representation of CRONs and species trees on the regulog page.
The basic functions of the graphics display module include the display of porosity parameter in three modes; display of sand thickness parameter in three modes; display of permeability parameter in three modes; and display of effective thickness parameter in three modes.
An enhanced annotated data were mapped on the A. oryzae genome by using the Perl Scalable Vector Graphics (SVG) Module V2.33 [ 34]. Figure 3 shows an example of gene and EST mapping on the contig of AP007151 which is a part of chromosome 1 of the A. oryzae genome.
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