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Indels were identified by the CUSP method and alignments were projected through a graphical viewer, StructView, described elsewhere [13].
Mapped reads were viewed using Tablet 1.12.02.06 [ 39], a graphical viewer for sequence alignment.
Summary: Tablet is a lightweight, high-performance graphical viewer for next-generation sequence assemblies and alignments.
The three main tools are: the Pathway Graphical Viewer, the Pathway Graphical Editor and the Relationship Search Tool.
The Pathway Graphical Viewer and Pathway Graphical Editor are complementary to each other and have many characteristics in common.
This new custom pathway, if saved, can also be used for comparisons in the Pathway Graphical Viewer.
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This intervention must be as efficient as possible and many graphical viewers and editors are available for this purpose.
Read alignment for the validation of SNPs was performed using the MapView graphical alignment viewer [29].
The query results and relevant knowledge are displayed using the NCBI graphical sequence viewer.
NCBI supports displays of LRG sequences and reported variants using client software (NCBI Genome Workbench [ 22]) and the graphical sequence viewer [ 23].
For example, protein structure/activity data annotations and images may be kept in paper lab notebooks, manuscripts might be stored electronically in Portable Document Format (PDF), and molecular structure coordinate files may be stored on a hard disk to be viewed and analyzed in graphical molecular viewers, to name a few.
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