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Marrink, S. J., de Vries, A. H. & Mark, A. E. Coarse grained model for semiquantitative lipid simulations.
A coarse grained model for HIV reactivation and apoptosis in cancer therapy.
A coarse grained model for proteins is developed and applied to HIV-1 protease.
The method of dissipative particle dynamics (DPD) is an effective, coarse grained model of the hydrodynamics of complex fluids.
As the coarse grained model inherits the features from an atomistic precursor, the latter needs to be most predictive.
Adopting a coarse grained model, the first main task is the calculation of the electric field [4] (on the basis of given dipole arrangements).
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From this fine-grained model we constructed a HMM model.
(b) Regulatory network representing a coarse-grained model of the HIV system with attempted reactivation.
Bereau, T. & Deserno, M. Generic coarse-grained model for protein folding and aggregation.
(d) A regulatory network representing a coarse-grained model of the apoptosis system with attempted HIV reactivation.
De Michele, C., Rovigatti, L., Bellini, T. & Sciortino, F. Self-assembly of short DNA duplexes: from a coarse-grained model to experiments through a theoretical link.
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