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Although a negative going significant cluster appeared for both the slowed down sequence and the strong AM stimulus condition around 100 110 ms, the earlier positive going cluster existed only in the strong AM stimulus condition (Diff(AM)).
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GO cluster were found using GO term finder option in www.candidagenome.org.org
Step 1. Constructing the co-expression networks for each GO cluster We build the networks for each GO cluster.
DAVID joined these into a single GO cluster with an enrichment score of 16.8.
High translational activity possessed by HGMEC was reflected by the overexpression of "translation and energy metabolism" GO cluster.
Vascular development and angiogenesis is the highest enriched GO cluster in which the EC-restricted genes are overrepresented (Enrichment score 4.72).
To explore the biological processes that were interrupted in ESCC patients, we performed a GO cluster analysis on all the somatically-mutated genes detected in this study.
The GO cluster enrichment score is based on geometric mean of member's p-values and is used to rank their biological significance.
Similarly, DAVID also identified a second GO cluster containing chromosome, centromere region of chromosome, chromosomal part, centromere, chromosomal protein, cytoskeleton GO terms etc (p-values from 1.45e- to 1.46e-5 1.46e-5
An increased frequency of occurrence (an enrichment) of genes in the FEG dataset annotated to a specific GO term implies the importance of that GO cluster to fermentation completion.
Next, for each node in the network, we retrieved the protein-protein interaction network for all neighbors within the GO cluster and placed the interactions into the GO network.
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