Suggestions(1)
Exact(6)
Here we applied the jumping profile Hidden Markov Model genotyping program (jpHMM), whose genotyping accuracy has been established [ 16– 16].
Furthermore, the Crossbow [ 21] genotyping program applies the MapReduce workflow on Hadoop to launch many copies of the short-read aligner Bowtie [ 20] in parallel.
The recent systematic genotyping program has provided a large amount of data.
We estimated genome-wide linkage disequilibrium (LD) using the graphical genotyping program GTT 2.0 (Van Berloo 2008).
The second product is an Affymetrix 44 100 SNP GeneChip (Matsuzaki et al., 2004) designed through the company's custom genotyping program.
Viral nucleotide sequences obtained from each PCR-positive sample were submitted to the web-based genotyping program at the National Center for Biotechnology Information (NCBI) (http://www.ncbi.nlm.nih.gov/projects/genotyping/formpage.cgi) to identify the corresponding HBV genotype.
Similar(54)
Currently, our laboratory in conjunction with a National Institute for Occupational Safety and Health funded multicenter asthma genotype program (RO1 OH008795-01) centered at the University of Cincinnati is collecting data on multiple variants in a single population to help establish the validity of this model.
In total, 23 Tag SNPs covering the two genes were selected for genotyping through Tagger program.
In total, 23 Tag SNPs covering DRD2 and SLC6A3 were selected for genotyping through Tagger program [ 29].
In our breeding programs genotyping large proportions of the population of potential bull dams was not possible due to cost limitations.
If the trend in Maryland noted by Bishai et al. (20) and Sterling et al. (24) is true in otherwise well-served, financially viable TB control programs, genotyping of M. tuberculosis isolates will be essential for public health interventions in these settings.
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