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Alternative SNPs were genotyped if technical difficulties using the 2nd screen Sequenom genotyping platform were encountered.
Markers for Fluidigm SNP genotyping platform.
Using ddPCR, we designed a multiplex ultrasensitive genotyping platform for 3 common EGFR mutations.
Genotyping was performed using the Illumina Infinium genotyping platform with a 6 K SNP chip, resulting in 469 polymorphic SNPs.
Given these attractive characteristics, the developed approach might provide a great genotyping platform for pathogenic diagnosis and genetic analysis.
"Once it passes muster, then we will capture it on our genotyping platform.
These controls were used nonetheless to provide the best matched genotyping platform controls available.
For example, this assay has some similarities with Sequenom MassARRAY iPLEX genotyping platform [38].
We next tested the familial cohort for replication using a different genotyping platform.
The SNP rs2293607 is not typed by the Hapmap and therefore not included in any high-throughput genotyping platform.
All individuals that passed initial QC were re-clustered together and SNPS were interrogated on the Affymetrix 6.0 genotyping platform.
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