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In so doing, we provide one of the largest series of HPV genotyping data in cervical cancer to date.
The systematic collection of cervical cancer HPV genotyping data by the screening registry will facilitate prevention and monitoring of HPV type-specific disease burden.
We used targeted genotyping data as a benchmark to assess accuracy of variant calling, and to identify copy number variations of the CYP2D6 gene.
The systematic collection of cervical cancer HPV genotyping data by the screening registry will facilitate prevention and monitoring of the HPV type-specific disease burden.
The WTCCC2 DNA, genotyping, data quality control and informatics group (S.D., S.E., E. Gray, S.E.H. and C.L). executed GWAS sample handling, genotyping and quality control.
Genotyping data were compared to imputation data derived from Illumina HumanHap300 chip genotyping.
Process and genotyping data were exported into an internal LIM System.
Description of the origin of samples and genotyping data is detailed in Table 1.
All analyses were performed in a blinded fashion with the laboratory operators unaware of genotyping data.
CDe genotyping data analyses.
Genotyping data acquisition was supervised by CL.
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