Sentence examples for genomic variant from inspiring English sources

In the case of the 14 populations from the 1000 Genomes Project, the genomic variant files (VCF) were downloaded from the 1000 Genomes Project web site and mapped over the genomic positions of the 720 miRNAs.

In this section, we describe how a single reference genome can be augmented with genomic variant information gathered from an arbitrary collection of genomes.

We have facilitated visualization of external data (such as genome variants reported in Database of Genomic Variant and dbSNP 138) along with the KWP1 genome.

A number of population-based studies have shown that this type of genomic variant can affect as much as 12% of the human genome.

There are several others, including: de novo transcriptome assembly [ 3] and de novo alternative splicing calling [ 4] from transcriptomic NGS data (RNA-seq); metagenome assembly [ 5] from metagenomic NGS data; and genomic variant detection [ 6] from genomic NGS data using a reference genome.

The genomic variation module for human genome build 36 (hg18) consists of indels, inversions, CNVs data obtained from Database of Genomic Variant [ 15].

Other examples are the 1000 genomes project data, the Database of Genomic Variants [34], and more local databases like LuCamp containing 700.000 SNPS from 2000 Danish individuals [35].

Therefore, whole genome sequencing is necessary for a detailed study of rare genomic variants.

The Database of Genomic Variants currently listed more than 15,000 CNV loci in the human genome (The Database of Genomic Variants 2013).

Characterizing large genomic variants is essential to expanding the research and clinical applications of genome sequencing.

At the outset, it gives the impression that phenotypic effects are predictable from genomic variants.