Sentence examples for genomic suites from inspiring English sources

Hierarchical clustering and PCA were performed using Partek Genomic Suites Ver. 6.5 software (Partek Incorporated, St . Louis MO).

CDH1, ERBB3 and ZEB1 signatures were generated by Partek Genomic Suites version 6.6 by using Student's t-test with FDR of 0.05.

The detection and determination of genomics events (gains, losses, amplifications and breakpoints) was performed using GLAD (Gain and Loss Analysis of DNA) software [ 16] for GeneChip® Human Mapping 50 K Xba Array, and Genomic Segmentation algorithm of Partek Genomic Suite for Genome-Wide Human SNP Array 6.0.

Data were analysed using the statistical methods available in the Partek® Genomic Suite 6.5 (Partek Incorporated, St Louis, Missouri, USA).

The resulting text files were imported into the Partek Genomic Suite (PGS; St . Louis MO, USA) for preprocessing, normalization, and statistical analysis.

All analyses were performed using the Partek® Genomic Suite software package version 6.3 Beta.

CEL files into Partek Genomic Suite software (Agilent), and data were normalized using the RMA (Robust Multichip Averaging) algorithm.

CEL data was analyzed with Partek Genomic Suite vs 6.5 (Partek Inc., St . Louis MO) which can normalize and process multiple datasets simultaneously.

Raw data have been imported in Partek Genomic Suite 6.4 software (Partek Inc., St . Louis MO), transformed in log2 and normalized by quantile normalization.

CEL files produced by GCOS software for each array were then imported into Partek Genomic Suite and analyzed using the Copy Number Analysis workflow.

Principal component analysis (PCA) used normalized expression data in the Partek Genomic Suite using all probe sets or probe sets filtered for the basal cell signature genes.