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Third, putative candidates are aligned to the genome to check the genomic position of breakpoints.
It follows from our definitions that in the absence of genomic rearrangement events, positional orthologs retain the genomic position of their most recent common ancestor.
A small number of tools exist that allow users to inspect the genomic position of query genes in target genomes.
Maximum, average, and median gaps were calculated for each analysis based on genomic position of SNP on the bovine UMD3.1 genome assembly.
Figure 6 depicts the genome wide map of FST windows indicating the genomic position of the most diverse regions.
The genomic position of the insertion (chr/position ; based on MGSCv37/mm9 genome assembly).
However, the copy number and the genomic position of the transgene that integrates into the mouse genome vary in different operation.
To precisely examine the genomic position of the iTSCs, 10 kb windows of the genome position were defined relatively to the RefSeq gene positions.
We also defined the genomic position of the snail and scratch genes of every species whose genome is completely sequenced (Additional file 3).
Because of the conserved genomic position of the element in other vertebrates, we focused our analysis on the lamprey orthologs of the Lmbr1 gene.
Actually, the results of karyotyping are affected by the quality of samples and the genomic position of CNVs [11].
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com