Results: Here we present a novel method, the Genomic Fusion Detection algorithm, to predict fusion genes on a genomic level based on SNP-array data.
The location of drug adducts at the genomic level depends on how these short motifs are distributed in larger domains.
Besides characterising the constructed networks for their various graph properties, we have systematically determined if the differences observed between these organisms at the genomic level reflect on the overall topology and characteristics of their metabolic networks.
We first propose a general classification scheme for evolutionary recurrence at the genomic level, based on the type of driving force mutation or selection and the environmental and genomic circumstances underlying these forces.
Particularly successful have been those methods that predict interactions at the genomic level based on the detection of pairs of protein families with similar evolutionary histories (similarity of phylogenetic trees: mirrortree).
We advocate that providing annotation in an open-access searchable database available to the public domain will give an unprecedented foundation to interrogate the fundamental molecular structure and interactions of coral symbiosis and allow critical questions to be addressed at the genomic level based on combined aspects of evolutionary, developmental, metabolic, and environmental perspectives.
To better understand how green algae respond to stress on a genomic level, we focused on the retention and loss of gene family members.
Therefore, we examined a total of 28 neognaths (Additional file 1: Table S2) on a genomic level and four on a transcriptional level in order to achieve a good sample distribution over the Neognathae pedigree (see Additional file 1: Figure S2) [ 29, 27, 30].
The level of homology between genomes of different species is variable at both the species and genomic level, depending both on the overall relatedness of the two species at hand and on the underlying physiology and genomic architecture which define the species.
To evaluate whether MLSA results are representative of population structure on the genomic level, comparative genome hybridization (CGH) was performed.
