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These sequences distinguished the 2 genomic groups of B. hermsii identified previously with other loci.
MLST of the isolates from these 5 patients showed that both genomic groups of B. hermsii were present on the island and in the same cabin (21 ).
The 2 genomic groups of B. hermsii were also distinct from isolates of B. turicatae and B. parkeri, for which we undertook a similar analysis (5 ).
The second protocol, a LightCycler-PCR hybridization assay (Roche Diagnostics, Mannheim, Germany) (8 ), simultaneously detects and genotypes the 3 genomic groups of B. burgdorferi s. l.
Spirochetes in both genomic groups of B. hermsii are transmitted by the same species of tick (4 ), sympatric in the northern parts of their range, and pathogenic in humans.
Sequences for the loci were each aligned with homologous sequences from other borrelia in our collection, and each locus grouped the spirochete within the 2 genomic groups of B. hermsii described previously (4, 6 ).
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The other genomic group of CDC group F-1 is represented by strain CDC G5911 (sequence X81904).
The term "Probe set" refers to the contribution of genomic groups to the final set of probes.
The coexistence of a large number of genomic groups within local B. burgdorferi s.l.l
These species were chosen to cover most of the genomic groups and clades in potato, all of the species recognized in tomato [ 24], and appropriate outgroups.
Computer simulations predicted rapid adaptive radiation of genomic groups as population size increases.
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