Sentence examples for genomic features for from inspiring English sources

Comparative analysis of seven parasitic flatworm genomes identified shared genomic features for the ecto- and endoparasitic lineages, such as a substantial reduction of the core bilaterian gene complement, including the homeodomain-containing genes, and a loss of the piwi and vasa genes, which are considered essential for animal development.

Additionally, Drosophila has certain attractive genomic features for artificial selection, such as a manageable genome size, a rapidly decaying linkage disequilibrium structure, and high intraspecific genetic variation (Mackay et al. 2012).

This paper applies ML to data from somatic mutations, copy number alterations, DNA methylation and gene expression from 1,000 cancer cell lines to model drug response of the cell lines and demonstrates the importance of genomic features for prediction.

Using high-throughput reduced representation bisulphite sequencing and single-molecule-based sequencing, we generated DNA methylation maps covering most CpG islands, and a representative sampling of conserved non-coding elements, transposons and other genomic features, for mouse embryonic stem cells, embryonic-stem-cell-derived and primary neural cells, and eight other primary tissues.

By now there have been several tools, such as GenomeRunner (Dozmorov et al., 2012) and GREAT (McLean et al., 2010), which can annotate and analyze the non-coding genomic features for input genomic regions.

Genomic features for bacterial species analyzed.

> To further investigate the larger number of retrocopies in Platyrrhini genomes, we assessed if additional genomic features accounted for the retrocopies enrichment.

Collinear regions are reliable genomic features used for phylogenomic analysis among closely related genomes while linking the genomic diversity with phenotypic differences in a meaningful way.

For closely related genomes, collinear regions (LCBs in this study) at the DNA level are reliable genomic features used for phylogenomic analysis while linking the genomic diversity with phenotypic differences in a meaningful way.

As expected among the genomic features enriched for significantly trait-associated SNPs were the OMIM morbid regions, identified as regions associated with traits in GWAS and linkage studies [ 29]; these regions may approximate a positive control.

Exploiting the local hopping activity of the Sleeping Beauty transposon, the lacZ reporter gene was dispersed throughout the Shh region to systematically map the genomic features responsible for expression activity.