Sentence examples for genomic density of from inspiring English sources

For a first comparison the genomic density of imperfect STRs has been plotted against the genome size of the twelve species analysed in this study.

The genomic density of pre-miRNAs is shown in Figure  2.

In D. pulex, the genomic density of TRs was low compared to the arthropod species D. melanogaster and A. mellifera.

This range depends on the genomic density of the underlying data and can span tens of kilobases for NGS alignments, hundreds of megabases for typical variant (SNP) files, or whole chromosomes for sparse feature files.

There are several notable aspects of these repeats: first of all, the true genomic density of 17 nucleotide repeats is likely to be underestimated in the current assembly since several scaffolds start or end with a 17-nucleotide repeat.

This explains why the genomic density of TRs found in D. melanogaster is twice as high as in D. pulex even though the total number of TRs is lower (Table 4).

The genome sizes as well as the genomic densities of STRs vary considerably among the 12 taxa.

Genomic densities of TR classes show high dissimilarities among the different genomic regions of D. pulex, D. melanogaster, and A. mellifera.

A more detailed comparison of the genomic densities of mono- to hexanucleotide repeat classes of all 12 taxa is presented in Figure 2. Whereas the upper panel shows the absolute repeat class densities, the lower panel shows their relative contribution to the STR density.

The total number of microsatellites and the genomic density (number of microsatellites per Mb of the genome) are shown in Table  1 for each species.

Our analysis found that the genomic density distribution of porcine pre-miRNAs (number of pre-miRNAs per Mb of individual chromosome) is, in general, roughly even (Figure S4G).