Sentence examples for genomic alignment of from inspiring English sources

Block boundaries indicate breakpoints of genome rearrangements Genomic alignment of putative MLO orthologs (OG5, OG7) in C. lanatus, C. melo and C. pepo synthenic regions (chromosomes or scaffolds).

We employed a novel metric, SiPhy [45], to assess the substitution rate of each new microRNA across a genomic alignment of 29 mammalian species (manuscript in preparation).

One of the powers of this approach is that the entire pipeline of methods used to assemble the correlation matrix is completely metadata independent – only the genomic alignment of probe sequences and the quantitative measurements made by the microarray were used.

Agarose gel-purified amplicons were sequenced directly using BigDye Terminator v3.1 cycle sequencing kit (Applied Biosystems, Foster City, CA; primer sequences available upon request) designed from a genomic alignment of strains 37997, LR2006 OPY15561561, TSI-GSD-218, Ross, and RSU1 sequence.

The genomic alignment of 30 vertebrates by MultiZ was downloaded from UCSC [ 17, 18].

As expected, the genomic alignment of contigs resulted in a high proportion of mapped loci.

We developed a genome-based computational pipeline that uses genomic alignments of mRNAs and probe set consensus sequences to identify high-quality probe sets and assign these to groups based on their patterns of genomic overlap.

The genomic alignments of GPR1 and ZDBF2 were obtained from the UCSC Genome Browser database (genome.ucsc.edu/) for human (GRCh37/hg19) and mouse (NCBI37/mm9) genomes.

Probesets that occurred in intron-like gaps in the genomic alignments of at least 10 ESTs and which occurred at least five times as frequently in gaps than in aligned blocks were designated as intronic.

Additional file 2: The visualized genomic alignments of Prevotella taxa.

Additional file 2: Global genomic alignments of part of the HoxB cluster (from HoxB9 to HoxB6 ).