Sentence examples for genomic alignment and from inspiring English sources

For the whole-genome resequencing workflow, finally, the software uses BWA for genomic alignment and calls single nucleotide polymorphisms with SAMtools [ 13] and structural variations with Delly [ 16].

Sequence common to the GAS genomes constituting the endogenous metagenome core, were identified by a combination of genomic alignment and gene content comparisons.

JCVI (J. Craig Venter Institute); JGI Joint Genome Institutee) The five genomes were compared using Artemis Comparison Tool (ACT) [ 15], which enabled genomic alignment and visualization of BLASTN results.

The absolute genomic coordinates of the integration sites where defined as a result of the combination of genomic alignment and vector relative orientation data.

This change simplified genomic alignment and, more importantly, enabled single-nucleotide resolution of retrotransposon integration sites.

Genomic alignment and SNP detection were carried out as described in Methods.

Genomic alignments and PhastCons scores were downloaded from the UCSC genome browser website [ 14, 15].

To determine the ease of cross-species comparison, genomic alignments and putative orthologues were searched for in both human and rat genomes compared to mouse alpha-defensins.

The algorithms that generate genomic alignments and transcript annotations differ for the three platforms.

Genomic alignments and base-pair numbering relate to Build NCBI m37, Ensembl release 59.37 L of the mouse genome.

REDHORSE is an efficient analytical pipeline that serves as a bridge between genomic alignments and existing recombination detection algorithms.