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Conventional diagnostic tests usually detect one or a small number of things at a time, like a key genomic abnormality.
Recently, chromogenic in situ hybridization, which enables simultaneous visualization of both genomic abnormality and the morphology of tumor cells, has gained attention.
The drug Herceptin became the first precision medicine in 1998 when it gained FDA approval for patients with a type of breast cancer caused by a specific genomic abnormality.
Trisomy 19 is a CLL-associated genomic abnormality observed in ∼5% of CLL cases [15], [17].
No genomic abnormality in the ABCB7 gene was identified in our cases.
For instance, extra copies of Chromosome 7 can be observed as the sole genomic abnormality in colon polyps [5].
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Thus, we argue that our observation is not an artifact of the genomic abnormalities of cancer genomes.
Bouska, A. et al. Genome-wide copy-number analyses reveal genomic abnormalities involved in transformation of follicular lymphoma.
Therefore, we used whole-genome CNV analysis, which is more sensitive in detecting genomic abnormalities than karyotyping, to evaluate the extent of genomic instability in HiPSCs.
To carry out comprehensive analysis of genomic abnormalities in HNSCC, various platforms are available such as whole-genome array comparative genomic hybridization (CGH) analysis, structural variation analysis/SNP array screening, and chromosome- or gene-specific CGH arrays.
Extensive genomic characterization of human cancers presents the problem of inference from genomic abnormalities to cancer phenotypes.
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