Sentence examples for genome sequence aligning from inspiring English sources
Segments of the reference genome sequence aligning to the reads originally showing the mismatches were then aligned with the validation sequence for comparison of called with confirmed mismatches.
On the other hand, only 79.2%% of the HZ genome sequence aligned to BOV-10_179 scaffolds.
Comparative genomic analysis on a microsytenic scale, using the QTL-associated genomic sequence, identified synteny from chestnut to other plant genomes ranging from 5.4 to 12.9 % of the genome sequences aligning.
These were combined with the eukaryotic genome sequences, aligned with mafft ver. 5.861 [56] using the default settings.
Whole-genome sequencing, aligned to the hg19 genome in the BAM format at ×30 of coverage, of two cell lines HCC1143 and HCC1954, matching normal blood, and simulated admixtures at tumor cellularity of 20%, 40 %, 60, and 80%, were obtanded in March 2014 from the TCGA4 benchmark cohort (https://cghub.ucsc.edu/datasets/benchmark_download.html).
First, a genome contig sequence aligned to the query transcript sequence with the largest value of both length coverage and sequence identity is selected using MEGABLAST (Altschul et al., 1997).
The P. aeruginosa M18 genome sequence was aligned to those of other sequenced P. aeruginosa genomes currently at NCBI with the use of MUMmer [ 29].
The NP51 whole genome sequence was aligned with closely related LAB clustering within the same well-supported clade in a LAB phylogeny derived from 30 conserved amino acid encoding sequence to identify orthologs.
The P. putida LS46 chaparonin gene (cpn 60) universal target (UT) sequence was obtained from the P. putida LS46 genome sequence and aligned with the cpn 60 UT sequences of 29 Pseudomonas strains available in the Integrated Microbial Genome database Markowitz et al. [2006]).
The integrated white clover genetic linkage map and the Medicago truncatula genome sequence were aligned.
Each of these block outlines surrounds a region of the genome sequence that aligned to part of another genome.
