Sentence examples for genome nucleotide from inspiring English sources

(A) Maximum likelihood phylogenetic tree of complete macluravirus genome nucleotide sequences.

(B) Pairwise genome-wide sequence identities of the macluravirus genome nucleotide sequences.

Calculation of average genome nucleotide identity (ANI) among viral genomes was calculated with the Gegenees software with the following parameters: fragment size=100 and step size=50 (refs 56, 57).

Phylogenetic relationships were inferred using the maximum likelihood method based upon the Jukes Cantor model for the whole genome nucleotide analysis63, and the Poisson correction model for the fiber-knob amino acid analysis64, using MEGA X software65.

In addition, the transcription-coupled nucleotide-excision repair pathway is required for the recognition and repair of a small subset of lesions that are not recognized by the global genome nucleotide excision repair pathway.

The significance of DNA variations among individuals, including single nucleotide polymorphisms (SNPs) and/or genome nucleotide mutations as well as to their detection by using new technology, will improve and facilitate the knowledge of each gene sequence.

Chloroplast genome nucleotide diversity investigation indicated a high degree of diversity in wild rice than in cultivated rice.

Looking for the MLSA or MLST genes in whole genome nucleotide sequences of the strains under study was realized using of the BLAST v. 2.2.23+ software.

Fig. 2 Chloroplast genome nucleotide diversity, genetic distance (Fst), and Tajima's D test. a Nucleotide diversity (pi) and Fst value of four groups.

Analyses of chloroplast genome nucleotide diversity (pi), population divergence (Fst value), Ts/Tv (Transition/Transversion ratio) and Tajima's D value were conducted using VCFtools (Danecek et al. 2011).

Chloroplast genome nucleotide diversity and genetic distance were investigated, indicated a high degree of diversity in wild rice than in cultivated rice.