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Another advantage to the GBS approach is that a reference genome need only be developed neighboring the restriction sites, and this can be done in the process of sample genotyping.
It seems that annotation of the melon genome need to be refined in these regions to resolve these discrepancies.
Thus, the determinants of nasal carriage, though necessarily a part of the variable genome, need not be restricted to those borne on mobile genetic elements.
Although the reference genome need not necessarily be the same species as the surveyed populations, more distant reference genomes will reduce mapping efficiency.
Because the gene order of any ancestral node is unknown, the probabilities of all possible gene adjacencies within the genome need to be calculated.
Similarly, the entire genome need not be sequenced if the study design is focusing only on variants affecting protein-coding genes.
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Allopolyploid genome needs wide structural variation to deal with genomic shock.
Lyons and others argue that the cat genome needs to be sequenced more thoroughly for it to be truly valuable to health and other studies.
First, a query genome needs to be selected by using the associated radio button in the "Find Genes In" column, as shown in Figure 3(i).
As demonstrated here, there is a limit to how close a near-neighbor genome needs to be in order to make meaningful protein identification, within confidence limits.
The relationship between cpDNA duplications, increased substitution rates, positive selection, and indel evolution in the chloroplast genome needs further scrutiny, and plant clpP1 appears to constitute an excellent model system for such studies.
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