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In the present study, we compared PA6 cells to various cell lines lacking the SDIA effect, and employed genome expression analysis to identify differentially-expressed signaling molecules.
The whole genome expression analysis revealed 139 differentially expressed genes upon interference with AP-2 proteins.
In contrast to the first whole genome expression analysis, a three class comparison revealed this time 330 differentially expressed genes distinguishing the three classes (p<0.001, FDR<0.15).
Whole genome expression analysis was performed using a 47 231 probe genechip to identify differentially expressed genes (DEGs) in the SK-N-Be(2 C DoxR and DoxR-v cell lines relative to WT.
Santiago TC, Mamoun CB. (2003) Genome Expression Analysis in Yeast Reveals Novel Transcriptional Regulation by Inositol and Choline and New Regulatory Functions for Opi1p, Ino2p, and Ino4p.
Genome expression analysis revealed that ALDH1A3 induced largely divergent gene expression in MDA-MB-231 and MDA-MB-468 cells which likely resulted in the opposing tumor growth effects.
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O'Rourke, S.M. & Herskowitz, I. Unique and redundant roles for HOG MAPK pathway components as revealed by whole-genome expression analysis.
An experiment combining whole-genome expression analysis with behavioral assays of naturally segregating genotypes could be used to address these questions.
Indeed, our whole-genome expression analysis revealed that genes affecting JA biosynthesis tended to be upregulated, indicating that HSP90-reduced plants may display increased resistance to insect herbivores.
Whole-genome expression analysis was carried out on GeneChip HG-U133 Plus 2.0 Arrays (Affymetrix) by MFT Services, Tuebingen, Germany.
The whole-genome expression analysis in our study reveals that the Notch signaling pathway is influenced by MGCD treatment.
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