Sentence examples for genes with binding from inspiring English sources
Genes with binding motifs for Ca++ may bind other divalent cations, and zinc binding has been shown to confer anti-microbial actions to S100A7 [27] and the S100A8/S100A9 (calgranulin) complex [28].
Applying chromatin immunoprecipitation coupled with deep sequencing (ChIP-Seq) in the human SGBS pre-adipocyte cell line, we identified genes with binding sites in their vicinity for the three TFs studied, PPARγ, CEBPα and LXR.
Those downregulated genes with binding sites for at least 2 out of the 6 selected microRNAs were then subjected to pathway analysis at http://david.abcc.ncifcrf.gov/tools.jsp [35].
In other words, as N increases, the number of genes with products corresponding to a binding site of gene i increases (in-degree), and the number of genes with binding sites corresponding to the product of gene i increases (out-degree).
Therefore, equivalent analyses were performed after excluding genes with binding sites of multiple categories.
The network is constructed by connecting genes with binding sites if their binding specificity is equal.
To illustrate the difference of these two cell lines, we first compared the overlapped number of genes with ERα binding peak and Pol-II binding peak, respectively.
Notably, we observed substantial decrease of expression levels of genes associated with binding of EZH2 while the accessibility level showed just a moderate change (Fig. 1e).
Genes associated with binding (i.e. recognising) chitin, a primary component of fungal cell walls and insect exoskeletons, and chitinases, enzymes designed to degrade chitins, were up-regulated in the xylem.
The molecular function category was rich in genes associated with binding (GO ID: 0005488), catalytic activity (GO ID: 0003824), and structural molecules (GO ID: 0005198).
Gene ontology (GO) analysis of the genes with constitutive binding sites in their promoters suggests that constitutive binding sites for several of the proteins are biologically meaningful.
