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Here, photosynthesis genes were retrieved from the rapidly increasing genomic data of purple bacteria.
The transcription start sites of the putative lectin genes were retrieved from the MSU database (Kawahara et al. 2013) and used for the construction of the map.
Nucleotide sequence of the genes were retrieved from NCBI database (http://www.ncbi.nlm.nih.gov/) and primers were designed using Primer3 software (http://bioinfo.ut.ee/primer3-0.4.0/ .ee/primer3-0.4.0/
The cDNA sequences of Hif1a, Vegfa and β-actin genes were retrieved from NCBI database.
A total of 74,784 CVs from 9513 genes were retrieved from the dbSNP database (CVS).
Additional porcine genome sequence representations for uncharacterized microarray genes were retrieved from Emsembl Trace Server [35].
The genome clusters and corresponding genes were retrieved from genome sequences by referencing genome annotation.
Orthologous groups of genes were retrieved by comparing the sequences to the eggNOG database [45].
Annotated UTR sequences of the target genes were retrieved from UTRdb [63].
Gene expression values for the selected genes were retrieved from two primary array databases.
The sequences of the preliminary potential miRNA genes were retrieved and classified using the MiPred program [44].
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