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The remaining genes were loaded into Ingenuity Pathway Analysis (IPA).
Genes were loaded using the gene set format with FI annotations and linker genes.
Lists of all significant genes on the array and differentially expressed genes were loaded to GO miner [ 39].
The gene lists containing a maximum of 1000 up- and downregulated genes were loaded into the Connectivity Map (please see Availability & requirements for more information).
To quantify the degree and determine the identity of shared and non-shared target genes between two ChIP-Seq experiments, the lists of target genes were loaded into the same MySQL table.
However, only two hubs (AMP kinase and phosphatase associated protein 46 and TAP46) were identified if these 9 genes were loaded into the Arabidopsis Interactions Viewer under higher stringency.
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Equal volume of PCR products (3 µl for G3PDH, and 10 µl for all other genes) was loaded for electrophoresis analysis, and amplified DNA fragments were visualized by ethidium bromide in agarose gels.
Averaged profiles show that promoters of these genes are loaded with H3K4me3 and Pol II in 2i.
This file is downloaded on a weekly basis and the ortholog relationships between rat, mouse and human genes are loaded into the RGD database by an automated pipeline.
It is conceivable that in these systems the toxins encoded by associated genes are loaded into a capsid-like structure that is then delivered to target cells.
In the Gene2miR mode, a set of genes is loaded as input and all miRNAs significantly associated with the input gene list are reported; significance is based on a user-defined threshold P-value (the default P-value is <0.05).
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com