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The probes for target genes were labeled with FAM and those for the housekeeping gene 18s were labeled with VIC.
For each functional category, all of known virulence genes were labeled as positive gene examples in the training set.
To reduce the oversampling of negative classes, only a subset of the remaining unlabeled genes were labeled as negative examples in the training set.
Neighboring genes were displayed by selecting the node close to the gene of interest (in red), co-expressed angiogenesis genes were labeled in blue and genes with EC-enrichment (from Supplementary table S3) indicated by an arrow.
SNPs located within carotenoid or anthocyanin biosynthetic genes were labeled according to the gene abbreviation.
Genes were labeled as present only if the probability of detection was P < 0.05.
Similar(39)
924 genes were labelled as T. brucei specific.
All other genes were labelled as not horizontally transferred.
Genes were labelled as outlined in the abbreviations section.
A significantly disproportionate 75% of the regulated genes were labelled with the GO term 'cellular process' and related children terms.
The probes for the target genes were labelled with the fluorescent dye, FAM on the 5′-end and a non-fluorescent quencher on the 3′-end.
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