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These genes were comprised of 8 ribosomal genes, 7 metabolism genes, 3 translation/transcription regulation genes, 4 bacteriocin-related genes, and various conserved hypothetical proteins (SI Table S5).
In 256 cases LTR retrotransposons were observed in protein-coding regions, while 50 distinct protein coding exons in 45 genes were comprised exclusively of LTR RetroTransposon Sequence LRTSS).
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In large-genome species like maize and barley, most of the DNA between genes is comprised of TEs, especially long terminal repeat (LTR) retrotransposons [78, 86, 89, 75].
Mammalian ribosomal RNA genes are comprised of several hundreds of transcription units clustered on a number of chromosomal loci [1], [2].
Second, it is known that the main regulatory regions of yeast genes are comprised of their immediate promoters, whereas in more complex organisms the regulatory regions would often lie far away from the gene at unknown locations.
Another set of genes is comprised of those for which the protein levels remained relatively constant while mRNA amounts decreased rapidly in stationary phase, hinting at lower rates of protein turnover than mRNA.
The two genes are comprised of at least 33 exons.
The 123 unique genes are comprised of 83 protein-coding, 36 transfer RNA and 4 ribosomal RNA genes, respectively.
Another functional category of affected genes is comprised of those whose expression is mediated by the QS mechanism.
The second class of R genes is comprised of those with LRR and PK domains (LRR-PK), such as Fls2 in Arabidopsis and Xa21 in rice [ 11, 12].
The CNL class of resistance genes is comprised of genes encoding proteins with a coiled-coil domain, a nucleotide binding site and a leucine-rich repeat (CC-NB-LRR).
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