Sentence examples for genes used here from inspiring English sources
As expected the expression profiles obtained from these genes, used here as markers for cycle progression, were very similar to data previously published [3], [4] and available at PlasmoDB.
We also evaluated the phylogenetic utility of different genes used here.
The collection of genes used here, includes evolutionarily widely dispersed genes with distinctive intron-exon patterns.
In the inset, the distribution of nucleotide modifications observed in squid mitochondria-encoded genes, used here as a negative control.
The 65 genes used here are highly conserved, present in all eukaryotes, predicted to be single copy and therefore are expected to be good indicators of evolutionary history.
However, for the 65 genes used here, no major differences were noted in GC content of the B. xylophilus nuclear genes compared with the other nematode species.
As shown in Figure 1A, expression levels of COX2, an inflammation and hypoxia responsive gene used here as a biomarker of cellular stress, were significantly higher in resections than in biopsies.
No specimens from Sardinia were available for sequencing, but sequences of the same fragment of the cox1 gene used here (776 overlapping positions) could be obtained for several Sardinian species from GenBank [ 29].
Regarding the second and fourth factors, we believe that they are also not the case for this study, because we used mitogenomic sequence data excluding peculiarly rapid evolving region (e.g., the control region), and because each mitochondrial gene used here was tested to perform well for dating vertebrate (tetrapod) divergences [ 61].
Neither the second factor nor the fourth factor are true in this study because quickly saturated third codon positions and the control region were excluded from the present analysis, and because each mitochondrial gene used here was tested and shown to perform well for dating vertebrate divergences [ 95].
Firstly, the file of sequence counts of our selected 3 regulators (NHR-28, FOS-1 and UNC-62) on the target genes was used here as the input of ChIP seq gene counts.
