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In HQ variations, the Asian wild rice held the most number of genic variations and involved genes except the African wild rice.
The gene expression analysis revealed that all reactions with assigned genes (except the tryptophan monooxygenase, reaction-7 in Additional file 4: Figure S2A) show gene members with strong diurnal expression patterns (Additional file 4: Figure S2B).
We have screened 250 samples from 185 NM and related myopathy families using the NM-CGH-array and identified nine large aberrations in NEB in nine families, but we have not detected such mutations in other NM genes except the one discussed here.
The challenge is to predict the rank order of induction/repression of a small subset of genes (the "prediction targets" in one of the four strains, given complete data for three of the strains, and data for all genes except the prediction targets in the other strain.
As a second experiment, we simulated conditions similar to the DREAM4 challenge, where transcription factors were unknown and tried to infer the network using as input features in each step of our procedure all 1471 genes except the target gene itself.
In the SUVH clade, the majority of the genes, except the V-2 group, were intronless.
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All the genes except for the EC 3.1.2.14 gene were homologous to E. coli genes and were used to improve the enzymatic activities to over-express components of the FAS pathway through metabolic engineering.
Most strain relations are supported by more than 90% of the genes, except for the R. massiliae clade, supported by 87.2% of core genes.
In our in silico experiment, all the genes, except for the one selected for deletion, are rhythmically expressed following their respective microarray profiles.
At least one of the nucleotides flanking each boundary, those most critical for splicing, were mutated in all genes except for the 5' boundary of the second introns.
All the known respiratory genes, except for the complex II genes sdh3 and sdh4, are present in the perennial ryegrass mitochondrial genome (Table 4).
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