Nodulation required from one to four nodD genes, depending on the host legume.
Of the 179 genes tested, 38 49 genes, depending on the cross, showed at least one such SNP in individual crosses (Additional file 1: Tables S4-S7).
This can be done by using one or multiple, validated reference genes, depending on the desired accuracy of the results.
Finally, EZH2 may have context-dependent functions so that it affects different genes, depending on the environment, such as the estrogen-receptor status of a cancer [ 41].
We further categorized these genes depending on whether they exhibited an extreme environmental or genotypic response for at least one time point.
In maize, 43-53 % of the 316 analyzed genes (depending on the cross and tissues) showed unequal allelic expression (Springer and Stupar, 2007b).
ATF3 has been shown to repress or activate the transcription of target genes depending on the cell context [17], [18].
SRF binds to the CArG box, which then transcriptionally activates or represses SM genes, depending on its associated cofactors.
However, our method is not restricted to proteins but is also applicable to genes depending on the biological question.
Thereby, it can either induce or inhibit the expression of identical genes, depending on the specific cellular fate.
On our array platform, we found that E2F4 binds approximately 500 to 700 human genes, depending on the tissue.
