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Three-hundred twenty-five genes on the array were defined as down regulated genes (data not shown).
This was confirmed in PathVisio statistical analysis by querying for number of genes (data not shown) showing 2-fold expression change.
The bioinformatics analysis of whole-genome sequencing data revealed that P. agarexedens may have four β-agarase genes (data not shown).
This pattern also holds for mouse genes (data not shown).
STO feeder cells did not express any of these chicken genes (data not shown).
In both samples we detected expression of all Prdm5 16 genes (data not shown).
Again, G8 had no effect on expression of the flanking genes (data not shown).
Same trend was observed for non-PK genes (data not shown).
No significant associations were demonstrated in the other candidate genes (data in Table S1).
However, transcript levels were only minimally affected by mutations in the individual genes (data not shown).
Most genes on the T. reesei scaffold 28 are highly similar to ascomycete genes (data not shown).
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