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The new virus, designated HPV 115, encodes five early genes and two late genes.
The tree was constructed using Bayesian and maximum likelihood methods with concatenated sequences of the first and second codon positions of 11 mitochondrial (mt) protein-coding genes and two mt rRNA genes (6,850 nucleotides).
A. fumigatus has three different ppo genes and two lox genes.
Comparing the MYH13 sequence with the other members of the fast/developmental cluster, the slow/cardiac MYH genes and two orphan skeletal MYH genes in the human genome provides insights into the origins of specialization in striated muscle myosins.
A. fumigatus contains three ppo genes and two lox genes, and A. flavus contains four ppo genes and one lox gene (Brown et al. [2008]; Affeldt et al. [2012]; Wadman et al. [2009]; Tsitsigiannis et al. [2005]).
Each fishes have two GRIN2A genes, two GRIN2B genes, two GRIN2C genes and two GRIN2D genes.
Most gene losses involve ribosomal protein genes and two respiratory genes, sdh3 and sdh4 [23], [23].
Recent studies suggest that there are two igf-1 genes and two igf-2 genes in zebrafish (our unpublished data).
This is in agreement with a recent independent analysis [21]; however, we identified an additional two genes and two pseudogenes.
They are spread across three loci (Fig. 3J): one locus (locus 3) with R and M genes and two loci (locus 4 and locus 5) by themselves.
24 receptor genes including 22 TcasGr genes and two TcasOr genes were located on chromosome 7 (Table 1 and Figure S3).
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