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The noisy sampling method is similar to noiseless sampling method, in which the only difference is the Gaussian noise μ = 0, σ = 0.02, …, 0.10 added in the process of generating dataset.
Simple coefficient matching was performed using SIMQUAL option for generating dataset similarity matrix [ 12].
The reference dataset was used as the hypothesis generating dataset, and all pathways with a FDR adjusted p-value < 0.1 were accepted for validation in the independent validation dataset.
The reference dataset was used as the hypothesis generating dataset, and genes with a FDR adjusted p-value < 0.1 were included in the gene set that was subsequently validated using the independent validation dataset.
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In the DZero experiment, and many like it, scientists are generating datasets with an extremely large number of data files.
In metagenomics, microbial communities are sequenced at increasingly high resolution, generating datasets with billions of DNA fragments.
We evaluate our method on a generated dataset from the TPC-D benchmark and a real video distribution application.
We integrate resulting data with a newly generated dataset from multiple myeloma and published screens from 15 other cancer cell types.
Monte Carlo simulation is used to generate dataset with varying characteristics such as multicollinearity, nonlinearity, etc. for the experiments.
Comparative analysis of similar datasets from 16 different types of cancer cell lines, including a newly generated dataset from multiple myeloma, allowed us to discover 210 non-housekeeping single-gene dependencies of PEL (PSODs).
The generated dataset is 16 GB.
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