We translated the S. flexneri 2a str.301 genome (downloaded from NCBI) into all six possible reading frames, generating a set of all possible peptides (larger than 15 amino acids) that could be encoded.
Based on the category-topic context, a set of selected categories (leftmost column of Figure 3) dynamically generates a set of topics involving all the selected categories (middle column of Figure 3).
The program automatically generates a set of restraints that includes the CHARMM forcefield, statistical preferences mined from PDB, and distance and dihedral restraints extracted from aligned templates, than generates a set of models which are consistent with all restraints.
To this purpose, all the 493 retrieved sequences of Acinetobacter plasmid-encoded proteins were used as input for the B2N software (see Material and Methods), generating a set of networks showing all the sequence identities existing among these proteins.
You can do a similar calculation for every relevant player in your league and generate a set of dollar values for all prospective players to be bought that equals the total amount of money all the teams in your league collectively have to spend.
Notably, as discussed in methods "Virtual screening of DrugBank by 3D molecular docking", our consensus screening platform discarded inactive compounds after each round of docking to generate a set of "active" compounds with all three peptides P1, P2, and P3.
In the motion control of a microrobot swarm, a key issue is how to autonomously generate a set of common coordinates among all robots and how to notify each robot of its heading direction in the generated common coordinates without any special devices for estimating location and bearing.
In the motion control of a microrobot swarm, a key issue is how to autonomously generate a set of common coordinates among all robots and to notify each robot of its heading direction in the generated common coordinates, without any special devices for estimating location and bearing.
Starting from the OF crystal structure, we performed multiple simulations, in which the substrate and/or different Na+ ions were either kept or removed at the beginning of each simulation, thereby generating a set of simulations that included all possible combinations of the protein, the substrate, and the ions.
The intuition behind extended factors is to generate a set of strings such that all the valid factors of the weighted string occur in at least one extended factor.
