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The M. tardigradum transcriptome is newly generated as a part of a general effort (www.funcrypta.de) to understand the adaptation and physiology of M. tardigradum.
Regardless of their genome type, RNA species are frequently generated as a part of their replication process, and for viruses with RNA genomes, their loading into the virion represents a critical step in the creation of infectious particles.
That is, while data on individual atoms and bonds certainly exists in PubChem, it is impossible to refer to, retrieve, or annotate these individual entities, at least not in a manner that would immediately meaningfully connect the annotations generated as a part of a given study with a given PubChem entity and would allow these annotations to be discovered and queried.
ROS is generated as a part of normal cellular metabolism.
Human DFC RNA-seq data were generated as a part of the BrainSpan project (http://www.brainspan.org).org
Reactive oxygen species are generated as a part of normal oxygen metabolism and are physiologically active in cell signalling.
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Genomic traces and ESTs were generated as part a collaborative genome project with the Joint Genome Institute and are publicly available (http://www.ncbi.nlm.nih.gov/Traces).nih.gov/Traces
At one point, the PFG was willing to offer Celera a year's worth of some form of intellectual property protection as a database provider for data generated as part of a collaboration, but Celera held out for 3-5 years [19].
The RNA-seq data represent a single lane of Illumina sequencing generated as part of a study unrelated to dosage compensation from an individual of unknown sex (Zemach et al. 2010).
The objective of the general methodology we present here is to compare a number of alignment programs to maximise the number of sequences generated as part of a sequencing project of species A, that are correctly positioned on the already assembled genome of a related species B. A set of paired-end reads must be obtained for species A as part of the genome sequencing project.
The Illumina data used for the error correction were generated as part of a different study and came from a specimen obtained at a different location (Point Judith, RI) than the rest of the genomic data.
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