Sentence examples for generated a contig for from inspiring English sources

For larger events, we generated a contig for only the left breakpoint, with 500 flanking bases.

Genotrace [ 37], which supports the reassembly of short spans of genomic DNA sequence from trace files, was used to generate independently a contig for comparison with the manually assembled one in ContigExpress.

While Velvet-Oases produced the longest contigs, Trinity generated a larger number of contigs.

The program also generated an html file for each contig, including the alignment information and SNP information.

The 454-FLX sequencing reads from SAG A generated a total of 1,008 contigs that accounted for 90% of the genome (Figure 4a, Table 1).

The sequence reads were assembled using Newbler [55] to generate a set of contigs for each commensal.

We generated 75,832 contigs for the control sample, with an average length of 428 nt.

We generated 20,927 contigs for American chestnut healthy stem and 50,612 contigs for Chinese chestnut healthy stem using the Newbler assembly software package (454 Life Sciences) with an average length of 273 nt and 330 nt, respectively.

The fingerprinting results generated multiple contigs for 14 of the probes while the clones for the last probe resulted in six single clones.

Quality trimming and filtration resulted in 28.4 million cleaned reads that were assembled using Trinity, and generated 239,116 contigs for the "extensive transcriptome catalogue".

We then used this information to generate a "fingerprint" for each available Yq contig, noting the order and orientation of the various copies of each gene present in each contig (see Additional File 4).